first off, let me say that I have NO idea why my stove feeds low, but my best guess is that the exhaust fan isn't powerful enough to drive the combusted gases of 5lbs an hour up the chimney.
you may be on track with the vac ting or maybe not , way to tell is if its dropping the vac switch the cycles are interrupted not shortened, so you would want to observe the auger motor during the time that the unit is doing the "low feed" if its a lockout issue (like a vac switch you will have normal time cycles except when the lockout opens in which case you would skip cycles. if the cycling is regular but shorter than it should be its something else probably having to do with the board